thapbi_pict.fasta_nr module

Prepare a non-redundant FASTA file using MD5 naming.

This implements the thapbi_pict fasta-nr ... command, using some of the same code internally as the thapbi_pict prepare-reads command.

thapbi_pict.fasta_nr.main(inputs: str | list[str], revcomp: str | list[str], output: str, min_abundance: int = 0, min_length: int = 0, max_length: int = 9223372036854775807, debug: bool = False) → None

Implement the thapbi_pict fasta-nr command.